BioGRID is a biomedical interaction repository with data compiled through comprehensive curation efforts. The current index is version 4.2.192 and searches 75,868 publications for 1,997,840 protein and genetic interactions, 29,093 chemical interactions and 959,750 post translational modifications from major model organism species.
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A social network of LastFM users which was collected from the public API in March 2020. Nodes are LastFM users from Asian countries and edges are mutual follower relationships between them. The vertex features are extracted based on the artists liked by the users. The task related to the graph is multinomial node classification - one has to predict the location of users. This target feature was derived from the country field for each user.
19 PAPERS • NO BENCHMARKS YET
An expert-annotated word similarity dataset which provides a highly reliable, yet challenging, benchmark for rare word representation techniques.
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Consists of 2,864 videos each with a label from 25 different classes corresponding to an event unfolding 5 seconds. The ERA dataset is designed to have a significant intra-class variation and inter-class similarity and captures dynamic events in various circumstances and at dramatically various scales.
4 PAPERS • NO BENCHMARKS YET
The IS-A dataset is a dataset of relations extracted from a medical ontology. The different entities in the ontology are related by the “is a” relation. For example, ‘acute leukemia’ is a ‘leukemia’. The dataset has 294,693 nodes with 356,541 edges between them.
KG20C is a Knowledge Graph about high quality papers from 20 top computer science Conferences. It can serve as a standard benchmark dataset in scholarly data analysis for several tasks, including knowledge graph embedding, link prediction, recommendation systems, and question answering .
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OLPBENCH is a large Open Link Prediction benchmark, which was derived from the state-of-the-art Open Information Extraction corpus OPIEC (Gashteovski et al., 2019). OLPBENCH contains 30M open triples, 1M distinct open relations and 2.5M distinct mentions of approximately 800K entities.
ChEMBL is a manually curated database of bioactive molecules with drug-like properties. It brings together chemical, bioactivity and genomic data to aid the translation of genomic information into effective new drugs.
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The dataset contains constructed multi-modal features (visual and textual), pseudo-labels (on heritage values and attributes), and graph structures (with temporal, social, and spatial links) constructed using User-Generated Content data collected from Flickr social media platform in three global cities containing UNESCO World Heritage property (Amsterdam, Suzhou, Venice). The motivation of data collection in this project is to provide datasets that could be both directly applicable for ML communities as test-bed, and theoretically informative for heritage and urban scholars to draw conclusions on for planning decision-making.
This dataset accompanies the paper `Learning the mechanisms of network growth' by the same authors. The dataset contains 6733 networks of size 20,000 each generated in accordance to different combination of three mechanisms: fitness, aging and preferential attachment. The goal is to use machine learning to identify the combination of mechanisms that was used to create the network. The dataset includes static features from the literature and two version of our newly developed dynamic features. net
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The AIDS Antiviral Screen dataset is a dataset of screens checking tens of thousands of compounds for evidence of anti-HIV activity. The available screen results are chemical graph-structured data of these various compounds.
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